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Fig 4. Sagittal in vivo MR imaging scans of contused rat spinal cord and corresponding histology. In vivo MR imaging in adult rats at 2 and 8 weeks after thoracic contusion injury displays signal intensity changes, which parallel the ex vivo MR imaging data (2D multisection gradient-echo; AC, section thickness, 311 µm; FOV, 30 x 30 mm; in-plane resolution, 117 x 117 µm; TE, 4.4 milliseconds; TR,
200 milliseconds, depending on heart rate; DF, section thickness, 300 µm; FOV, 40 x 25 mm; in-plane resolution, 156 x 98 µm; TE, 3.7 milliseconds; TR, 200 milliseconds, depending on heart rate). Scale bar AF, 5 mm; GO, 1 mm. Consecutive sagittal MR images are shown at 2 weeks (AC) and 8 weeks (DF) postinjury with corresponding histologic Nissl (GI) and Prussian-blue (JL) stained sections, and sections processed for ED1 immunohistochemistry (macrophages, monocytes; MO), all from the same animal. Arrows in A and B highlight the site of the impact. Hypointensities along ascending and descending axon projections in the dorsal columns (B and E) correlate with hemosiderin deposits (K) rather than macrophage/monocyte infiltration (O; respective areas are indicated by arrowheads). These changes increase from 2 weeks (C) until 8 weeks (G) postinjury. The clear reduction in cord diameter over time (B vs E and C vs F) corresponds to the atrophy seen in histologic sections (GO).