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Research ArticleBrain Tumor Imaging

Clinical and VASARI Features to Predict CDKN2A/B Homozygous Deletion in IDH-Mutant Astrocytomas: A Multicenter Study

Huiquan Yang, Zhengyang Zhu, Lu Zhou, Jianan Zhou, Zhennan Tao, Xi Wu, Chuanshuai Tian, Dongming Liu, Liangpeng Wei, Haoyao Wang, Zihe Zhao, Yan Zhu, Xun Wang, Tiexiang Li, Wenwei Lin, Yuxiang Dai, Xin Zhang and Bing Zhang
American Journal of Neuroradiology October 2025, 46 (10) 2107-2115; DOI: https://doi.org/10.3174/ajnr.A8861
Huiquan Yang
aFrom the Department of Radiology (H.Y., Z. Zhu., J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Nanjing Drum Tower Hospital, Affiliated Hospital of Medical School, Nanjing University, Nanjing, China
cMedical Imaging Center (H.Y., Z. Zhu, J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Affiliated Drum Tower Hospital, Medical School of Nanjing University, Nanjing, China
dInstitute of Medical Imaging and Artificial Intelligence (H.Y., Z. Zhu., J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Nanjing University, Nanjing, China
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Zhengyang Zhu
aFrom the Department of Radiology (H.Y., Z. Zhu., J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Nanjing Drum Tower Hospital, Affiliated Hospital of Medical School, Nanjing University, Nanjing, China
cMedical Imaging Center (H.Y., Z. Zhu, J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Affiliated Drum Tower Hospital, Medical School of Nanjing University, Nanjing, China
dInstitute of Medical Imaging and Artificial Intelligence (H.Y., Z. Zhu., J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Nanjing University, Nanjing, China
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Lu Zhou
bDepartment of Neurosurgery (L.Z., Z.T., Y.D.), Nanjing Drum Tower Hospital, Affiliated Hospital of Medical School, Nanjing University, Nanjing, China
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Jianan Zhou
aFrom the Department of Radiology (H.Y., Z. Zhu., J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Nanjing Drum Tower Hospital, Affiliated Hospital of Medical School, Nanjing University, Nanjing, China
cMedical Imaging Center (H.Y., Z. Zhu, J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Affiliated Drum Tower Hospital, Medical School of Nanjing University, Nanjing, China
dInstitute of Medical Imaging and Artificial Intelligence (H.Y., Z. Zhu., J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Nanjing University, Nanjing, China
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Zhennan Tao
bDepartment of Neurosurgery (L.Z., Z.T., Y.D.), Nanjing Drum Tower Hospital, Affiliated Hospital of Medical School, Nanjing University, Nanjing, China
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Xi Wu
aFrom the Department of Radiology (H.Y., Z. Zhu., J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Nanjing Drum Tower Hospital, Affiliated Hospital of Medical School, Nanjing University, Nanjing, China
cMedical Imaging Center (H.Y., Z. Zhu, J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Affiliated Drum Tower Hospital, Medical School of Nanjing University, Nanjing, China
dInstitute of Medical Imaging and Artificial Intelligence (H.Y., Z. Zhu., J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Nanjing University, Nanjing, China
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Chuanshuai Tian
aFrom the Department of Radiology (H.Y., Z. Zhu., J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Nanjing Drum Tower Hospital, Affiliated Hospital of Medical School, Nanjing University, Nanjing, China
cMedical Imaging Center (H.Y., Z. Zhu, J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Affiliated Drum Tower Hospital, Medical School of Nanjing University, Nanjing, China
dInstitute of Medical Imaging and Artificial Intelligence (H.Y., Z. Zhu., J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Nanjing University, Nanjing, China
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Dongming Liu
aFrom the Department of Radiology (H.Y., Z. Zhu., J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Nanjing Drum Tower Hospital, Affiliated Hospital of Medical School, Nanjing University, Nanjing, China
cMedical Imaging Center (H.Y., Z. Zhu, J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Affiliated Drum Tower Hospital, Medical School of Nanjing University, Nanjing, China
dInstitute of Medical Imaging and Artificial Intelligence (H.Y., Z. Zhu., J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Nanjing University, Nanjing, China
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Liangpeng Wei
aFrom the Department of Radiology (H.Y., Z. Zhu., J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Nanjing Drum Tower Hospital, Affiliated Hospital of Medical School, Nanjing University, Nanjing, China
cMedical Imaging Center (H.Y., Z. Zhu, J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Affiliated Drum Tower Hospital, Medical School of Nanjing University, Nanjing, China
dInstitute of Medical Imaging and Artificial Intelligence (H.Y., Z. Zhu., J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Nanjing University, Nanjing, China
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Haoyao Wang
aFrom the Department of Radiology (H.Y., Z. Zhu., J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Nanjing Drum Tower Hospital, Affiliated Hospital of Medical School, Nanjing University, Nanjing, China
cMedical Imaging Center (H.Y., Z. Zhu, J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Affiliated Drum Tower Hospital, Medical School of Nanjing University, Nanjing, China
dInstitute of Medical Imaging and Artificial Intelligence (H.Y., Z. Zhu., J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Nanjing University, Nanjing, China
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Zihe Zhao
fNanjing University Medical School (Z. Zhao,Y.Z., X. Wang), Nanjing, China
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Yan Zhu
fNanjing University Medical School (Z. Zhao,Y.Z., X. Wang), Nanjing, China
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Xun Wang
fNanjing University Medical School (Z. Zhao,Y.Z., X. Wang), Nanjing, China
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Tiexiang Li
gSchool of Mathematics and Shing-Tung Yau Center (T.L.), Southeast University, Nanjing, China
hNanjing Center for Applied Mathematics (T.L.,W.L.), Nanjing, China
iShanghai Institute for Mathematics and Interdisciplinary Sciences (T.L.,W.L.), Shanghai, China
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Wenwei Lin
hNanjing Center for Applied Mathematics (T.L.,W.L.), Nanjing, China
iShanghai Institute for Mathematics and Interdisciplinary Sciences (T.L.,W.L.), Shanghai, China
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Yuxiang Dai
bDepartment of Neurosurgery (L.Z., Z.T., Y.D.), Nanjing Drum Tower Hospital, Affiliated Hospital of Medical School, Nanjing University, Nanjing, China
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Xin Zhang
aFrom the Department of Radiology (H.Y., Z. Zhu., J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Nanjing Drum Tower Hospital, Affiliated Hospital of Medical School, Nanjing University, Nanjing, China
cMedical Imaging Center (H.Y., Z. Zhu, J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Affiliated Drum Tower Hospital, Medical School of Nanjing University, Nanjing, China
dInstitute of Medical Imaging and Artificial Intelligence (H.Y., Z. Zhu., J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Nanjing University, Nanjing, China
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Bing Zhang
aFrom the Department of Radiology (H.Y., Z. Zhu., J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Nanjing Drum Tower Hospital, Affiliated Hospital of Medical School, Nanjing University, Nanjing, China
cMedical Imaging Center (H.Y., Z. Zhu, J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Affiliated Drum Tower Hospital, Medical School of Nanjing University, Nanjing, China
dInstitute of Medical Imaging and Artificial Intelligence (H.Y., Z. Zhu., J.Z., X. Wu, C.T., D.L., L.W., H.W., X.Z., B.Z.), Nanjing University, Nanjing, China
eState Key Laboratory of Pharmaceutical Biotechnology (B.Z.), Nanjing University, Nanjing, China
jJiangsu Key Laboratory of Molecular Medicine (B.Z.), Nanjing, China
kJiangsu Provincial Medical Key Discipline (Laboratory) (B.Z.), Nanjing, China
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Abstract

BACKGROUND AND PURPOSE: Cyclin-dependent kinase inhibitor (CDKN)2A/B homozygous deletion holds an important value in the prognostic analysis of isocitrate dehydrogenase (IDH)-mutant astrocytomas. This study aimed to develop and validate a prediction model based on clinical and Visually AcceSAble Rembrandt Images (VASARI) MRI features for identifying CDKN2A/B homozygous deletion status in IDH-mutant astrocytomas.

MATERIALS AND METHODS: Preoperative MR images of 122 patients with astrocytoma (101 without CDKN2A/B homozygous deletion, and 21 with CDKN2A/B homozygous deletion) were retrospectively collected as a training set. Eighteen patients with astrocytomas from another center (14 without CDKN2A/B homozygous deletion, and 4 with CDKN2A/B homozygous deletion) were enrolled as an external test set. VASARI features in MR images of patients with astrocytoma were evaluated by radiologists. Prediction models for identifying CDKN2A/B homozygous deletion status based on clinical and VASARI features were constructed by using logistic regression.

RESULTS: Multivariate regression analysis showed that definition of enhancing margin (OR: 13.19, P = .003) was an independent predictor of CDKN2A/B homozygous deletion in IDH-mutant astrocytomas. The area under the curve of prediction model in the training set and external test set was 0.84 (95% CI, 0.73–0.96) and 0.96 (95% CI, 0.86–1.00), respectively. The optimal cutoff value of the nomogram calculated by using the Youden index was 124.20 points. Under the cutoff value, the prediction model exhibited 85% accuracy, 67% sensitivity, and 88% specificity in the training set, and 83% accuracy, 75% sensitivity, and 86% specificity in external test set.

CONCLUSIONS: The nomogram model based on clinical and VASARI MRI features was useful for prediction of CDKN2A/B homozygous deletion status in IDH-mutant astrocytomas.

ABBREVIATIONS:

AUC
area under the curve
CDKN
cyclin-dependent kinase inhibitor
CET
contrast-enhancing tumor
DCE
dynamic contrast-enhanced
FDR
false discovery rate
FISH
fluorescence in situ hybridization
IDH
isocitrate dehydrogenase
nCET
noncontrast-enhancing tumor
ROC
receiver operating characteristic
T1CE
T1 contrast-enhanced
VASARI
Visually AcceSAble Rembrandt Images
VIF
variance inflation factor
WHO
World Health Organization
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American Journal of Neuroradiology: 46 (10)
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Huiquan Yang, Zhengyang Zhu, Lu Zhou, Jianan Zhou, Zhennan Tao, Xi Wu, Chuanshuai Tian, Dongming Liu, Liangpeng Wei, Haoyao Wang, Zihe Zhao, Yan Zhu, Xun Wang, Tiexiang Li, Wenwei Lin, Yuxiang Dai, Xin Zhang, Bing Zhang
Clinical and VASARI Features to Predict CDKN2A/B Homozygous Deletion in IDH-Mutant Astrocytomas: A Multicenter Study
American Journal of Neuroradiology Oct 2025, 46 (10) 2107-2115; DOI: 10.3174/ajnr.A8861

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VASARI Features to Predict CDKN2A/B HD
Huiquan Yang, Zhengyang Zhu, Lu Zhou, Jianan Zhou, Zhennan Tao, Xi Wu, Chuanshuai Tian, Dongming Liu, Liangpeng Wei, Haoyao Wang, Zihe Zhao, Yan Zhu, Xun Wang, Tiexiang Li, Wenwei Lin, Yuxiang Dai, Xin Zhang, Bing Zhang
American Journal of Neuroradiology Oct 2025, 46 (10) 2107-2115; DOI: 10.3174/ajnr.A8861
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