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Improved Turnaround Times | Median time to first decision: 12 days

Research ArticleUltra-High-Field MRI/Imaging of Epilepsy/Demyelinating Diseases/Inflammation/Infection

Deep Learning Reconstruction for 7T MP2RAGE and SPACE MRI: Improving Image Quality at High Acceleration Factors

Zeyu Liu, Vishal Patel, Xiangzhi Zhou, Shengzhen Tao, Thomas Yu, Jun Ma, Dominik Nickel, Patrick Liebig, Erin M. Westerhold, Hamed Mojahed, Vivek Gupta and Erik H. Middlebrooks
American Journal of Neuroradiology November 2025, 46 (11) 2446-2454; DOI: https://doi.org/10.3174/ajnr.A8841
Zeyu Liu
aFrom the Department of Radiology (Z.L., V.P., X.Z., S.T., T.Y., E.M.W., V.G., E.H.M.), Mayo Clinic, Jacksonville, Florida
bDepartment of Radiology (Z.L.), Peking Union Medical College Hospital, Beijing, China
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Vishal Patel
aFrom the Department of Radiology (Z.L., V.P., X.Z., S.T., T.Y., E.M.W., V.G., E.H.M.), Mayo Clinic, Jacksonville, Florida
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  • ORCID record for Vishal Patel
Xiangzhi Zhou
aFrom the Department of Radiology (Z.L., V.P., X.Z., S.T., T.Y., E.M.W., V.G., E.H.M.), Mayo Clinic, Jacksonville, Florida
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Shengzhen Tao
aFrom the Department of Radiology (Z.L., V.P., X.Z., S.T., T.Y., E.M.W., V.G., E.H.M.), Mayo Clinic, Jacksonville, Florida
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Thomas Yu
aFrom the Department of Radiology (Z.L., V.P., X.Z., S.T., T.Y., E.M.W., V.G., E.H.M.), Mayo Clinic, Jacksonville, Florida
cAdvanced Clinical Imaging Technology (T.Y.), Siemens Healthineers International AG, Lausanne, Switzerland
dDepartment of Radiology (T.Y.), Lausanne University Hospital and University of Lausanne, Lausanne, Switzerland
eLTS5, Ecole Polytechnique Fédérale de Lausanne (EPFL) (T.Y.), Lausanne, Switzerland
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Jun Ma
fSiemens Medical Solutions USA, Inc (J.M.), Jacksonville, Florida
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Dominik Nickel
gMR Application Predevelopment (D.N., P.L.), Siemens Healthineers AG, Forchheim, Germany
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Patrick Liebig
gMR Application Predevelopment (D.N., P.L.), Siemens Healthineers AG, Forchheim, Germany
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Erin M. Westerhold
aFrom the Department of Radiology (Z.L., V.P., X.Z., S.T., T.Y., E.M.W., V.G., E.H.M.), Mayo Clinic, Jacksonville, Florida
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Hamed Mojahed
hSiemens Medical Solutions USA (H.M.), Scottsdale, Arizona
iDepartment of Radiology (H.M.), Mayo Clinic, Scottsdale, Arizona
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Vivek Gupta
aFrom the Department of Radiology (Z.L., V.P., X.Z., S.T., T.Y., E.M.W., V.G., E.H.M.), Mayo Clinic, Jacksonville, Florida
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Erik H. Middlebrooks
aFrom the Department of Radiology (Z.L., V.P., X.Z., S.T., T.Y., E.M.W., V.G., E.H.M.), Mayo Clinic, Jacksonville, Florida
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Abstract

BACKGROUND AND PURPOSE: Deep learning (DL) reconstruction has been successful in realizing otherwise impracticable acceleration factors and improving image quality in conventional MRI field strengths; however, there has been limited application to ultra-high-field MRI. The objective of this study was to evaluate the performance of a prototype DL-based image reconstruction technique in 7T MRI of the brain utilizing magnetization-prepared 2 rapid acquisition gradient echoes (MP2RAGE) and sampling perfection with application-optimized contrasts using different flip angle evolutions (SPACE) acquisitions, in comparison with reconstructions in conventional compressed sensing and controlled aliasing in parallel imaging techniques.

MATERIALS AND METHODS: This retrospective study involved 60 patients who underwent 7T brain MRI between June 2024 and October 2024, comprising 30 patients with MP2RAGE data and 30 patients with SPACE FLAIR data. Each set of raw data was reconstructed with DL-based reconstruction and conventional reconstruction. Image quality was independently assessed by 2 neuroradiologists by using a 5-point Likert scale, which included overall image quality, artifacts, sharpness, structural conspicuity, and noise level. Interobserver agreement was determined by using top-box analysis. Contrast-to-noise ratio (CNR) and noise levels were quantitatively evaluated and compared by using the Wilcoxon signed-rank test.

RESULTS: DL-based reconstruction resulted in a significant increase in overall image quality and a reduction in subjective noise level for both MP2RAGE and SPACE FLAIR data (all P < .001), with no significant differences in image artifacts (all P > .05). When compared with standard reconstruction, the implementation of DL-based reconstruction yielded an increase in CNR of 49.5% (95% CI, 33.0%–59.0%) for MP2RAGE data and 90.6% (95% CI, 73.2%–117.7%) for SPACE FLAIR data, along with a decrease in noise of 33.5% (95% CI, 23.0%–38.0%) for MP2RAGE data and 47.5% (95% CI, 41.9%–52.6%) for SPACE FLAIR data.

CONCLUSIONS: DL-based reconstruction of 7T MRI significantly enhanced image quality compared with conventional reconstruction without introducing image artifacts. The achievable high acceleration factors have the potential to substantially improve image quality and resolution in 7T MRI.

ABBREVIATIONS:

CAIPIRINHA
controlled aliasing in parallel imaging results in higher acceleration
CNR
contrast-to-noise ratio
CS
compressed sensing
DL
deep learning
IQR
interquartile range
MNI
Montreal Neurological Institute
MP2RAGE
magnetization-prepared 2 rapid acquisition gradient echoes
PD
proton density
SD
standard deviation
SPACE
sampling perfection with application-optimized contrasts using different flip angle evolutions
  • © 2025 by American Journal of Neuroradiology
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American Journal of Neuroradiology: 46 (11)
American Journal of Neuroradiology
Vol. 46, Issue 11
1 Nov 2025
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Zeyu Liu, Vishal Patel, Xiangzhi Zhou, Shengzhen Tao, Thomas Yu, Jun Ma, Dominik Nickel, Patrick Liebig, Erin M. Westerhold, Hamed Mojahed, Vivek Gupta, Erik H. Middlebrooks
Deep Learning Reconstruction for 7T MP2RAGE and SPACE MRI: Improving Image Quality at High Acceleration Factors
American Journal of Neuroradiology Nov 2025, 46 (11) 2446-2454; DOI: 10.3174/ajnr.A8841

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DL-Based Reconstruction for 7T MP2RAGE and SPACE
Zeyu Liu, Vishal Patel, Xiangzhi Zhou, Shengzhen Tao, Thomas Yu, Jun Ma, Dominik Nickel, Patrick Liebig, Erin M. Westerhold, Hamed Mojahed, Vivek Gupta, Erik H. Middlebrooks
American Journal of Neuroradiology Nov 2025, 46 (11) 2446-2454; DOI: 10.3174/ajnr.A8841
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