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Research ArticleNeuroimaging Physics/Functional Neuroimaging/CT and MRI Technology

Delineation of the Centromedian Nucleus for Epilepsy Neuromodulation Using Deep Learning Reconstruction of White Matter–Nulled Imaging

Megan V. Ryan, David Satzer, Houchun Hu, Daniel V. Litwiller, Dan W. Rettmann, Jody Tanabe, John A. Thompson, Steven G. Ojemann and Daniel R. Kramer
American Journal of Neuroradiology September 2025, 46 (9) 1868-1874; DOI: https://doi.org/10.3174/ajnr.A8766
Megan V. Ryan
aFrom the Department of Neurosurgery (M.V.R., D.S., J.A.T., S.G.O., D.R.K.), University of Colorado Anschutz Medical Campus, Aurora, Colorado
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David Satzer
aFrom the Department of Neurosurgery (M.V.R., D.S., J.A.T., S.G.O., D.R.K.), University of Colorado Anschutz Medical Campus, Aurora, Colorado
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  • ORCID record for David Satzer
Houchun Hu
bDepartment of Radiology (H.H., J.T.), University of Colorado Anschutz Medical Campus, Aurora, Colorado
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Daniel V. Litwiller
cGE HealthCare (D.V.L.), Denver, Colorado
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Dan W. Rettmann
dGE HealthCare (D.W.R), Rochester, Minnesota
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Jody Tanabe
bDepartment of Radiology (H.H., J.T.), University of Colorado Anschutz Medical Campus, Aurora, Colorado
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  • ORCID record for Jody Tanabe
John A. Thompson
aFrom the Department of Neurosurgery (M.V.R., D.S., J.A.T., S.G.O., D.R.K.), University of Colorado Anschutz Medical Campus, Aurora, Colorado
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Steven G. Ojemann
aFrom the Department of Neurosurgery (M.V.R., D.S., J.A.T., S.G.O., D.R.K.), University of Colorado Anschutz Medical Campus, Aurora, Colorado
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Daniel R. Kramer
aFrom the Department of Neurosurgery (M.V.R., D.S., J.A.T., S.G.O., D.R.K.), University of Colorado Anschutz Medical Campus, Aurora, Colorado
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Abstract

BACKGROUND AND PURPOSE: Neuromodulation of the centromedian nucleus (CM) of the thalamus has shown promise in treating refractory epilepsy, particularly for idiopathic generalized epilepsy and Lennox-Gastaut syndrome. However, precise targeting of CM remains challenging. The combination of deep learning reconstruction (DLR) and fast gray matter acquisition T1 inversion recovery (FGATIR) offers potential improvements in visualization of CM for deep brain stimulation (DBS) targeting. The goal of the study was to evaluate the visualization of the putative CM on DLR-FGATIR and its alignment with atlas-defined CM boundaries, with the aim of facilitating direct targeting of CM for neuromodulation.

MATERIALS AND METHODS: This retrospective study included 12 patients with drug-resistant epilepsy treated with thalamic neuromodulation by using DLR-FGATIR for direct targeting. Postcontrast-T1-weighted MRI, DLR-FGATIR, and postoperative CT were coregistered and normalized into Montreal Neurological Institute (MNI) space and compared with the Morel histologic atlas. Contrast-to-noise ratios were measured between CM and neighboring nuclei. CM segmentations were compared between an experienced rater, a trainee rater, the Morel atlas, and the Thalamus Optimized Multi Atlas Segmentation (THOMAS) atlas (derived from expert segmentation of high-field MRI) by using the Sorenson-Dice coefficient (Dice score, a measure of overlap) and volume ratios. The number of electrode contacts within the Morel atlas CM was assessed.

RESULTS: On DLR-FGATIR, CM was visible as an ovoid hypointensity in the intralaminar thalamus. Contrast-to-noise ratios were highest (P < .001) for the mediodorsal and medial pulvinar nuclei. Dice score with the Morel atlas CM was higher (median 0.49, interquartile range 0.40–0.58) for the experienced rater (P < .001) than the trainee rater (0.32, 0.19–0.46) and no different (P = .32) than the THOMAS atlas CM (0.56, 0.55–0.58). Both raters and the THOMAS atlas tended to under-segment the lateral portion of the Morel atlas CM, reflected by smaller segmentation volumes (P < .001). All electrodes targeting CM based on DLR-FGATIR traversed the Morel atlas CM.

CONCLUSIONS: DLR-FGATIR permitted visualization and delineation of CM commensurate with a group atlas derived from high-field MRI. This technique provided reliable guidance for accurate electrode placement within CM, highlighting its potential use for direct targeting.

ABBREVIATIONS:

ANT
anterior nucleus of the thalamus
CM
centromedian nucleus
DBS
deep brain stimulation
DLR
deep learning reconstruction
EDGE-MICRA
edge-enhancing gradient echo multi-image coregistration and averaging
FGATIR
fast gray matter acquisition T1 inversion recovery
IGE
idiopathic generalized epilepsy
LGS
Lennox-Gastaut syndrome
MER
microelectrode recording
MNI
Montreal Neurological Institute
MP2RAGE
magnetization-prepared rapid acquisition of 2 gradient echoes
mtt
mammillothalamic tract
QSM
quantitative susceptibility mapping
RNS
responsive neurostimulation
THOMAS
Thalamus Optimized Multi Atlas Segmentation
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American Journal of Neuroradiology: 46 (9)
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Cite this article
Megan V. Ryan, David Satzer, Houchun Hu, Daniel V. Litwiller, Dan W. Rettmann, Jody Tanabe, John A. Thompson, Steven G. Ojemann, Daniel R. Kramer
Delineation of the Centromedian Nucleus for Epilepsy Neuromodulation Using Deep Learning Reconstruction of White Matter–Nulled Imaging
American Journal of Neuroradiology Sep 2025, 46 (9) 1868-1874; DOI: 10.3174/ajnr.A8766

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CM Nucleus Imaging for Epilepsy Neuromodulation
Megan V. Ryan, David Satzer, Houchun Hu, Daniel V. Litwiller, Dan W. Rettmann, Jody Tanabe, John A. Thompson, Steven G. Ojemann, Daniel R. Kramer
American Journal of Neuroradiology Sep 2025, 46 (9) 1868-1874; DOI: 10.3174/ajnr.A8766
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