Heading for disaster: Fusarium graminearum on cereal crops

RS Goswami, HC Kistler - Molecular plant pathology, 2004 - Wiley Online Library
The rapid global re‐emergence of Fusarium head blight disease of wheat and barley in the
last decade along with contamination of grains with mycotoxins attributable to the disease …

The Fusarium graminearum Genome Reveals a Link Between Localized Polymorphism and Pathogen Specialization

…, D DeCaprio, LR Gale, S Gnerre, RS Goswami… - Science, 2007 - science.org
We sequenced and annotated the genome of the filamentous fungus Fusarium graminearum,
a major pathogen of cultivated cereals. Very few repetitive sequences were detected, and …

[HTML][HTML] mRNA transcript quantification in archival samples using multiplexed, color-coded probes

PP Reis, L Waldron, RS Goswami, W Xu, Y Xuan… - BMC …, 2011 - Springer
Background A recently developed probe-based technology, the NanoString nCounter™
gene expression system, has been shown to allow accurate mRNA transcript quantification …

Pathogenicity and In Planta Mycotoxin Accumulation Among Members of the Fusarium graminearum Species Complex on Wheat and Rice

RS Goswami, HC Kistler - Phytopathology, 2005 - Am Phytopath Society
Fusarium head blight (FHB), or scab, is a destructive disease of small grains caused by
members of the Fusarium graminearum species complex, comprised of at least nine distinct, …

Factors affecting the success of next‐generation sequencing in cytology specimens

S Roy‐Chowdhuri, RS Goswami, H Chen… - Cancer …, 2015 - Wiley Online Library
BACKGROUND The use of cytology specimens for next‐generation sequencing (NGS) is
particularly challenging because of the unconventional substrate of smears and the often …

Targeted gene replacement in fungi using a split-marker approach

RS Goswami - Plant Fungal Pathogens: Methods and Protocols, 2012 - Springer
Targeted gene replacement is one of the primary strategies for functional characterization of
fungal genes and several methods have been developed for this purpose over the years. …

[HTML][HTML] Analysis of pre-analytic factors affecting the success of clinical next-generation sequencing of solid organ malignancies

H Chen, R Luthra, RS Goswami, RR Singh… - Cancers, 2015 - mdpi.com
Application of next-generation sequencing (NGS) technology to routine clinical practice has
enabled characterization of personalized cancer genomes to identify patients likely to have …

Identification of factors affecting the success of next-generation sequencing testing in solid tumors

RS Goswami, R Luthra, RR Singh… - American journal of …, 2016 - academic.oup.com
Objectives: Clinical laboratories are rapidly implementing next-generation sequencing (NGS)
tests for mutation analysis, but there are few guidelines regarding sample quality for …

[HTML][HTML] Transcriptome analysis of the plant pathogen Sclerotinia sclerotiorum interaction with resistant and susceptible canola (Brassica napus) lines

K Chittem, WR Yajima, RS Goswami… - PLoS …, 2020 - journals.plos.org
Sclerotinia stem rot is an economically important disease of canola (Brassica napus) and is
caused by the fungal pathogen Sclerotinia sclerotiorum. This study evaluated the differential …

Hotspot mutation panel testing reveals clonal evolution in a study of 265 paired primary and metastatic tumors

RS Goswami, KP Patel, RR Singh… - Clinical Cancer …, 2015 - AACR
Purpose: We used a clinical next-generation sequencing (NGS) hotspot mutation panel to
investigate clonal evolution in paired primary and metastatic tumors. Experimental Design: A …